The detailed information of tRNA gene sequence


Sequence ID>WENV180256415
Genome IDOBEQ010816499
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 820
End posion on genome 724
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
accctgagtc
tRNA gene sequence 
GGGAGTGGATGGGGCCCGGTGGCTCTTGCGGTCTTCAAAACCGTTGTGCCTCGCTAACCT
CGGGGTAGGTGGGTTCGACTCCCTCCCACTCCCGCCA
Downstream region at tRNA end position 
agcaaccgac
Secondary structure (Cloverleaf model)
>WENV180256415	SeC	TCA
                   c      GCCA agcaaccgac
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T C
                    A     C T C C C     A
      C C C        T      |   | | |     G
    G       G G G G       G T G G G     C
    G       | + | +                 T T
    T       C T C T
      G G          T     TGTGCCTCGCTAACCTCGGGGTAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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