The detailed information of tRNA gene sequence


Sequence ID>WENV180257538
Genome IDOBEQ010919799
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 397
End posion on genome 305
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctttcctcgC
tRNA gene sequence 
GGGGAGGTGGCAGAGTGGTCGAATGCGAGCGCCTGCTAAGCGCTTGAGCGGGCTTTTTCC
CGCTCCCCGGGTTCGAATCCCGGCCTTCCCGAtt
Downstream region at tRNA end position 
ccgttttcgc
Secondary structure (Cloverleaf model)
>WENV180257538	Ser	GCT
                   C      GAtt ccgttttcgc
                     G - C
                     G - C
                     G - C
                     G + T
                     A - T
                     G - C
                     G - C          T A
                    T     G G C C C     A
      T G A        G      | | | | |     G
    G       G A C G       C C G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGAGCGGGCTTTTTCCCGCTCC
                    A - T
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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