The detailed information of tRNA gene sequence


Sequence ID>WENV180258407
Genome IDOBEQ011004313
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 367
End posion on genome 282
Amino Acid Ser
Anticodon ACT
Upstream region at tRNA start position 
tattaatcaa
tRNA gene sequence 
GGAGAGGTCGCATAGTGGTCGAGTGCAGGGGTTTACTAAACCCCCGAGCCGTAAGGCTTC
GCGAGTTCGAATCTCGCCCTCTCCGCaa
Downstream region at tRNA end position 
cttttcacgc
Secondary structure (Cloverleaf model)
>WENV180258407	Ser	ACT
                   a      GCaa cttttcacgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C T C     A
      T G A        C      | | | | |     G
    G       T A C G       G C G A G     C
    G       + | | |                 T T
    T       G T G C
      C G A        A     CGAGCCGTAAGGCTTC
                    G - C
                    G - C
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    A C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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