The detailed information of tRNA gene sequence


Sequence ID>WENV180259493
Genome IDOBEQ011108009
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 1988
End posion on genome 1893
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttcattatgt
tRNA gene sequence 
GGAGAAGGATGGGGCCCGGTGGCCCCACCGGTCTTCAAAACCGAGTTGCGTGGCGTAACG
CTGCGCGGATGGTTCGACTCCATCCCTTCTCCGCCA
Downstream region at tRNA end position 
cttctttgtc
Secondary structure (Cloverleaf model)
>WENV180259493	SeC	TCA
                   t      GCCA cttctttgtc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C          T C
                    A     C T A C C     A
      C C C        T      | | | | |     G
    G       G G G G       G A T G G     C
    G       | | | |                 T T
    T       C C C C
      G G          A     GTTGCGTGGCGTAACGCTGCGCG
                    C   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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