The detailed information of tRNA gene sequence


Sequence ID>WENV180259977
Genome IDOBEQ011158157
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 169
End posion on genome 266
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gatctccgaa
tRNA gene sequence 
GGGAGTGCATCGGGTTCTGGTGTCCCGCCCGGCCTTCAAAGCCGGTGTTTCCTGCCACAA
GCGGGAAGGGTGGGTTCGATTCCCACACGCTCCCGCCA
Downstream region at tRNA end position 
ttttcccctt
Secondary structure (Cloverleaf model)
>WENV180259977	SeC	TCA
                   a      GCCA ttttcccctt
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C
                     C   A          T T
                    A     C A C C C     A
      C T T        T      | | | | |     G
    T       G G G C       G T G G G     C
    G       | | | |                 T T
    G       C C C G
      T G T        C     TGTTTCCTGCCACAAGCGGGAAGG
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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