The detailed information of tRNA gene sequence


Sequence ID>WENV180260154
Genome IDOBEQ011174650
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 48789
End posion on genome 48882
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
agggaggcgc
tRNA gene sequence 
GGAGGGCAGCGGGGGCTGGTGCCCCTTCCGGTCTTCAAAACCGGCGAGAGGCCAGGCGGT
CTCTGGTGCGTTCGATTCGCACGGCCCTCCGCCA
Downstream region at tRNA end position 
cacttcccca
Secondary structure (Cloverleaf model)
>WENV180260154	SeC	TCA
                   c      GCCA cacttcccca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A   G          T T
                    G     C A C G C     A
      T C G        C      | | | | |     G
    G       G G G G       G T G C G     C
    G       | | | +                 T T
    T       C C C T
      G C          T     CGAGAGGCCAGGCGGTCTCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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