The detailed information of tRNA gene sequence


Sequence ID>WENV180260172
Genome IDOBEQ011176138
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 308
End posion on genome 404
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggggatcctt
tRNA gene sequence 
GAGAGTGCGCGTCTGCCGGTGCAGGCCTCGGTCTTCAAAACCGCTGATGGGGCGCTGACG
CGTTCCGTGGTGGGTTCGACTCCCATGCACTCTCGCAg
Downstream region at tRNA end position 
agcgcctgcg
Secondary structure (Cloverleaf model)
>WENV180260172	SeC	TCA
                   t      GCAg agcgcctgcg
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T C
                    G     T A C C C     A
      C C G        C      + | | | |     G
    G       T C T G       G T G G G     C
    G       | | + |                 T T
    T       A G G C
      G C          C     TGATGGGGCGCTGACGCGTTCCGTG
                    T   C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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