The detailed information of tRNA gene sequence


Sequence ID>WENV180260401
Genome IDOBEQ011197984
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 424
End posion on genome 327
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttacactttc
tRNA gene sequence 
GGAAGCGTCTAGGAACCCGGTGGGCCTCCCGGACTTCAAATCCGGTGTCCGGCTCTAGAC
AAGTCGGAGGTGGGTTCGACTCCCACACGCTTCCGCCA
Downstream region at tRNA end position 
acggagaagg
Secondary structure (Cloverleaf model)
>WENV180260401	SeC	TCA
                   c      GCCA acggagaagg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    C     C A C C C     A
      C C A        T      | | | | |     G
    C       A G G A       G T G G G     C
    G         | | |                 T T
    G       G C C T
      T G G        C     TGTCCGGCTCTAGACAAGTCGGAG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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