The detailed information of tRNA gene sequence


Sequence ID>WENV180260529
Genome IDOBEQ011208250
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 3398
End posion on genome 3497
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tttccgacgc
tRNA gene sequence 
GGAAGTGCATCCTGGACTGGTGCTGGGCTCGGTCTTCAAAACCGATGGGCCTCTGCGAAG
GCAGCGGGTCGGCGGGTTCGATTCCCGTGCGCTTCCGCCA
Downstream region at tRNA end position 
tagcagctga
Secondary structure (Cloverleaf model)
>WENV180260529	SeC	TCA
                   c      GCCA tagcagctga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     G - C
                     C - G          T T
                    A     T G C C C     A
      C A G        T      + | | | |     G
    T       G T C C       G C G G G     C
    G       + + | |                 T T
    G       T G G G
      T G C        C     TGGGCCTCTGCGAAGGCAGCGGGTCG
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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