The detailed information of tRNA gene sequence


Sequence ID>WENV180260547
Genome IDOBEQ011209742
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 25906
End posion on genome 25994
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttgcctcaa
tRNA gene sequence 
GGAGACGTGCCGGAGCGGCCGAACGGGCGCGCCTGGAAAGCGCGTAACCTCCGAAAGGGG
GTTCTTGGGTTCAAATCCCAACGTCTCCGaaa
Downstream region at tRNA end position 
ttttttaaca
Secondary structure (Cloverleaf model)
>WENV180260547	Ser	GGA
                   a      Gaaa ttttttaaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     A A C C C     A
      C G A        G      | | | | |     A
    G       G G C C       T T G G G     C
    G         | | |                 T T
    C       A C G G
      C G A        G     TAACCTCCGAAAGGGGGTTC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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