The detailed information of tRNA gene sequence


Sequence ID>WENV180260590
Genome IDOBEQ011212878
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 898
End posion on genome 803
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
agtctcactc
tRNA gene sequence 
GAGAGTGCGTGGCATCCGGTGATGTCCTCGGTCTTCAAAACCGTTGACGGGGCGCGTTGC
GTTCCGTGGTGGGTTCGACTCCCATGCACTCTCGCAg
Downstream region at tRNA end position 
cggtggcctg
Secondary structure (Cloverleaf model)
>WENV180260590	SeC	TCA
                   c      GCAg cggtggcctg
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T C
                    G     T A C C C     A
      C C T        T      + | | | |     G
    G       A C G G       G T G G G     C
    G       | | + |                 T T
    T       T G T C
      G A          C     TGACGGGGCGCGTTGCGTTCCGTG
                    T   T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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