The detailed information of tRNA gene sequence


Sequence ID>WENV180261493
Genome IDOBEQ011299937
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 2096
End posion on genome 2183
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctttatttaa
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTTAAGGCACAGGTTTGCTAAACCTGCGTATCGCAAGGTACC
AGAGGTTCGAATCCTCTTCTCTCCGCCA
Downstream region at tRNA end position 
taaaaacccc
Secondary structure (Cloverleaf model)
>WENV180261493	Ser	GCT
                   a      GCCA taaaaacccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T C T C C     A
      T G A        G      | | | | |     G
    G       G C C G       A G A G G     C
    G         | | |                 T T
    C       A G G C
      T T A        A     CGTATCGCAAGGTACC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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