The detailed information of tRNA gene sequence


Sequence ID>WENV180261650
Genome IDOBEQ011314062
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 3225
End posion on genome 3317
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
agaatccgcc
tRNA gene sequence 
cGGAGGTGAACGGGGTCTGGTGGCCCCCCTCGTCTTCAAAACGAGTGGGACGGGTGATCC
CCGTCCGGTGGGTTCGATTCCTGCCACCTCCGCCgc
Downstream region at tRNA end position 
agagcggcga
Secondary structure (Cloverleaf model)
>WENV180261650	SeC	TCA
                   c      CCgc agagcggcga
                     c - G
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    A     C G T C C     A
      C T G        A      | + + | |     G
    T       G G G C       G T G G G     C
    G       | | |                   T T
    G       C C C C
      T G G        C     TGGGACGGGTGATCCCCGTCCG
                    C - G
                    T - A
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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