The detailed information of tRNA gene sequence


Sequence ID>WENV180262074
Genome IDOBEQ011354614
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 2316
End posion on genome 2406
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attggatttT
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCTGAAAGCAGCGGTCTCGAAAACCGTTAAGGGCCGTAAGGTT
CTTCTAGAGTTCGAATCTCTACCTCTCCGTgg
Downstream region at tRNA end position 
ttcgactcgc
Secondary structure (Cloverleaf model)
>WENV180262074	Ser	CGA
                   T      GTgg ttcgactcgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     A T C T C     A
      T G A        G      | | | | |     G
    G       G T C G       T A G A G     C
    G         | | |                 T T
    C       A A G C
      T G A        A     TAAGGGCCGTAAGGTTCTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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