The detailed information of tRNA gene sequence


Sequence ID>WENV180263557
Genome IDOBEQ011486567
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 272
End posion on genome 182
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttcggggtca
tRNA gene sequence 
GGAGAGGTAGCCAAGTGGTCGACGGCGGCGGTTTGCTAAACCGCTGTACGGGCGAAATCC
CGTACCGAGGGTTCGAATCCCTCCCTCTCCGttt
Downstream region at tRNA end position 
ttcttgctag
Secondary structure (Cloverleaf model)
>WENV180263557	Ser	GCT
                   a      Gttt ttcttgctag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    G       A C C G       G A G G G     C
    G         | | |                 T T
    T       C G G C
      C G A        G     TGTACGGGCGAAATCCCGTACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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