The detailed information of tRNA gene sequence


Sequence ID>WENV180263817
Genome IDOBEQ011509230
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 993
End posion on genome 917
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tttcctacga
tRNA gene sequence 
CGCGGGGTGGGGCAGTCCGGTAGCTCGTTGGGCTCATAACCCAAAGGTCCCAGGTTCAAA
TCCTGGCCCCGCTACCA
Downstream region at tRNA end position 
atcaaaaaaa
Secondary structure (Cloverleaf model)
>WENV180263817	fMet	CAT
                   a      ACCA atcaaaaaaa
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G T C C     A
      T G A        G      | | | | |     A
    C       C G G G       C C A G G     C
    C       | | + |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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