The detailed information of tRNA gene sequence


Sequence ID>WENV180264127
Genome IDOBEQ011540320
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 376
End posion on genome 279
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GGAAGCGCTTGGCCGGCTGGTGCCGCCCTCGGTCTTCAAAACCGATGTGGGGCAGTTAGG
CTGTCCCGGGCAGGTTCGATTCCTGTGCGTTTCCGCCA
Downstream region at tRNA end position 
gatcccgcga
Secondary structure (Cloverleaf model)
>WENV180264127	SeC	TCA
                   c      GCCA gatcccgcga
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     C - G
                     G - C
                     C - G          T T
                    T     T G T C C     A
      C G G        T      + | | | |     G
    T       C C G G       G C A G G     C
    G         | | |                 T T
    G       C G C C
      T G C        C     TGTGGGGCAGTTAGGCTGTCCCGG
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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