The detailed information of tRNA gene sequence


Sequence ID>WENV180265015
Genome IDOBEQ011622643
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 4565
End posion on genome 4476
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttttttccac
tRNA gene sequence 
GGAGGCGTGGCAGAGTGGTCTAATGCGCCGGTGTCGAAAACCGTTTGGGGAGAAATCCCC
TCGGAGGTTCGACTCCTTCCGCCTCCGCCA
Downstream region at tRNA end position 
attgggaaaa
Secondary structure (Cloverleaf model)
>WENV180265015	Ser	CGA
                   c      GCCA attgggaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T C
                    T     C T T C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G A G G     C
    G         | | |                 T T
    T       A T G C
      C T A        G     TTGGGGAGAAATCCCCTC
                    C   T
                    C - G
                    G - C
                    G - C
                    T - A
                  G       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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