The detailed information of tRNA gene sequence


Sequence ID>WENV180266188
Genome IDOBEQ011728856
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 1729
End posion on genome 1644
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaaattattt
tRNA gene sequence 
GGAGGGTTCGCATAGCGGTCTAGTGCGCACGCTTGGAAAGCGTGTGTGGGGAAACCCACC
GAGAGTTCGAATCTCTCACCCTCCGCaa
Downstream region at tRNA end position 
ttaaagattt
Secondary structure (Cloverleaf model)
>WENV180266188	Ser	GGA
                   t      GCaa ttaaagattt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C T C T C     A
      C G A        C      | | | | |     G
    G       T A C G       G A G A G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TGTGGGGAAACCCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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