The detailed information of tRNA gene sequence


Sequence ID>WENV180266862
Genome IDOBEQ011795546
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 5073
End posion on genome 4986
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aattgcaaat
tRNA gene sequence 
GGAGACGTGCCTGAGAGGCTGAAGGGGCTCGTTTCGAAAACGAGTGTAGCTGTAAGGTTA
CCAGAGGTTCGAATCCTCTCGTCTCCGCaa
Downstream region at tRNA end position 
attcgaaacg
Secondary structure (Cloverleaf model)
>WENV180266862	Ser	CGA
                   t      GCaa attcgaaacg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C T C C     A
      A G A        G      | | | | |     G
    G       G T C C       A G A G G     C
    G         + | |                 T T
    C       A G G G
      T G A        G     TGTAGCTGTAAGGTTACC
                    C - G
                    T - A
                    C - G
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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