The detailed information of tRNA gene sequence


Sequence ID>WENV180267116
Genome IDOBEQ011817625
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 2338
End posion on genome 2264
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctcagggtaa
tRNA gene sequence 
AGGGGAGTAGGTTCAACGGTAGACCATCGGTCTCCAAAACCGAGAGTGGGGGTTCGAATC
CCTCCTCCCCTGCCA
Downstream region at tRNA end position 
gtttcggcgg
Secondary structure (Cloverleaf model)
>WENV180267116	Trp	CCA
                   a      GCCA gtttcggcgg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A C        A      | + | | |     G
    C       T T G G       G G G G G     C
    G       + | | |                 T T
    G       G A C C
      T A          A     GAGT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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