The detailed information of tRNA gene sequence


Sequence ID>WENV180267289
Genome IDOBEQ011837360
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 672
End posion on genome 759
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aatatgtatt
tRNA gene sequence 
GGTGGGATGCTGGAGCGGCCTAACAGGCTGGTTTCGAAAACCATGCGAGACGCAAGTCTC
ACGGGGGTTCAAATCCCTCTCCCACCGCtt
Downstream region at tRNA end position 
cgaggcgctt
Secondary structure (Cloverleaf model)
>WENV180267289	Ser	CGA
                   t      GCtt cgaggcgctt
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     A
    G       G G T C       G G G G G     C
    G         | | |                 T T
    C       A C A G
      C T A        G     GCGAGACGCAAGTCTCAC
                    C   T
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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