The detailed information of tRNA gene sequence


Sequence ID>WENV180269528
Genome IDOBEQ012074922
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 284
End posion on genome 187
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
taatgccttt
tRNA gene sequence 
GGGAGCGGATGGGTCCTGGTGGGCTTCGCGGGCTTCAAACCCGTTGGCTCTGATCCTTCG
ATCGGAACGGTGGGTTCGACTCCCTCCCGCTCCCGCCA
Downstream region at tRNA end position 
ccaaattagg
Secondary structure (Cloverleaf model)
>WENV180269528	SeC	TCA
                   t      GCCA ccaaattagg
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T C
                    A     C T C C C     A
      T C C        T      |   | | |     G
    G       T G G G       G T G G G     C
    G       + | + +                 T T
    T       G C T T
      G G          C     TGGCTCTGATCCTTCGATCGGAACG
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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