The detailed information of tRNA gene sequence


Sequence ID>WENV180270846
Genome IDOBEQ012208377
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 332
End posion on genome 240
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gattactacC
tRNA gene sequence 
GGTAGCGTGGCGGAGTTTGGCTTATCGCACCTGTCTCCAAAACAGGCAGACACTTTCAAC
GGTCTCGAGGGTTCAAATCCCTCCGCTACCGTaa
Downstream region at tRNA end position 
tttgactgtt
Secondary structure (Cloverleaf model)
>WENV180270846	Trp	CCA
                   C      GTaa tttgactgtt
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     A
  T         G G C G       G A G G G     C
  G         + | | |                 T T
  G         T C G C
    C T T A        A     CAGACACTTTCAACGGTCTC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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