The detailed information of tRNA gene sequence


Sequence ID>WENV180271328
Genome IDOBEQ012260505
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 403
End posion on genome 303
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
nnnnnnnnnT
tRNA gene sequence 
GGAGGGCGATTGGGTCTGGTGACTTGCCCGGTCTTCAAAGCCGGCGGCTGCGACGCGAAG
GCGGCGCAGCGGTGAGTTCGATTCTCACCGCCTTCCGCC
Downstream region at tRNA end position 
Aatcctcttg
Secondary structure (Cloverleaf model)
>WENV180271328	SeC	TCA
                   T      CGCC Aatcctcttg
                     G - C
                     G + T
                     A - T
                     G - C
                     G - C
                     G   G
                     C   C          T T
                    G     C A C T C     A
      C T G        A      | | | | |     G
    T       G G T T       G T G A G     C
    G       | +   +                 T T
    G       C T T G
      T G A        C     CGGCTGCGACGCGAAGGCGGCGCAGCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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