The detailed information of tRNA gene sequence


Sequence ID>WENV180272126
Genome IDOBEQ012347571
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 2229
End posion on genome 2140
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cttgtgcggc
tRNA gene sequence 
GGAGGGATGACCGAGTGGCCGAAGGTGCCTGATTCGAAATCAGGTGTACCCGGAAGGGTA
CCGCGGGTTCAAATCCTGCTCCCTCCGCCA
Downstream region at tRNA end position 
gtcgacccgt
Secondary structure (Cloverleaf model)
>WENV180272126	Ser	CGA
                   c      GCCA gtcgacccgt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
      T G A        G      | | + | |     A
    G       G C C A       G C G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTACCCGGAAGGGTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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