The detailed information of tRNA gene sequence


Sequence ID>WENV180272564
Genome IDOBEQ012391569
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 375
End posion on genome 471
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gatcgaaaaT
tRNA gene sequence 
GGAGGGGAAGCGCTCCCGGTGGGGCGGCTGGCCTTCAAAGCCAGAGAGGGCCGCCAGACG
GTTCTTAGTGGGTTCGACTCCCACTCTCTTCCGCC
Downstream region at tRNA end position 
Acctcctgta
Secondary structure (Cloverleaf model)
>WENV180272564	SeC	TCA
                   T      CGCC Acctcctgta
                     G - C
                     G + T
                     A - T
                     G - C
                     G + T
                     G - C
                     G + T          T C
                    A     C A C C C     A
        C T        A      | | | | |     G
      C     C G C G       G T G G G     C
      C     |   |                   T T
      G     G G G G
        G T        C     AGAGAGGGCCGCCAGACGGTTCTTA
                    G - C
                    G - C
                    C - G
                    T - A
                    G   A
                  G       A
                  C       C
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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