The detailed information of tRNA gene sequence


Sequence ID>WENV180272908
Genome IDOBEQ012429061
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 6
End posion on genome 95
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
nnnnncgtcg
tRNA gene sequence 
GGAGGGGCGGCAGAGCGGTCGAATCCGGCGGTCTCGAAACCCGTTACGGGCCGTTAGGTC
CGTCGAGGGTTCAAATCCCTCCCCCTCCGCtc
Downstream region at tRNA end position 
attgagccga
Secondary structure (Cloverleaf model)
>WENV180272908	Ser	CGA
                   g      GCtc attgagccga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    C     C T C C C     A
      C G A        G      | | | | |     A
    G       G A C G       G A G G G     C
    G         |   |                 T T
    T       A T C C
      C G A        G     TACGGGCCGTTAGGTCCGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T   C
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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