The detailed information of tRNA gene sequence


Sequence ID>WENV180273035
Genome IDOBEQ012442361
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 139
End posion on genome 235
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atccccacgc
tRNA gene sequence 
cGGAGAGTGAAGGGTGCCTGGTGGCCCTCGCGGTCTTCAAAACCGTTGTTCCGATGCCCT
GCATTGGAAGGAGTGTTCGATTCGCTCCCTCTCCGCCAc
Downstream region at tRNA end position 
accgatcttt
Secondary structure (Cloverleaf model)
>WENV180273035	SeC	TCA
                   c      CCAc accgatcttt
                     c - G
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T   C          T T
                    G     C T C G C     A
    C C G T        A      | | | + |     G
  T         G G G A       G A G T G     C
  G         | | | |                 T T
  G         C C C T
    T G G          C     TGTTCCGATGCCCTGCATTGGAAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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