The detailed information of tRNA gene sequence


Sequence ID>WENV180277021
Genome IDOBHV01034763
Search identical group
Phylum/Class[OBHV] metagenome; water
Species
Start position on genome 301
End posion on genome 209
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgttcttttg
tRNA gene sequence 
GGGAGTAGTTGGGGCCCGGTGGCTCCCCCGGCCTTCAAAGCCGCGCGTGTCCCGCCAAAG
GGACTGGTAGGTTCGACTCCTATCTACTCCCGCta
Downstream region at tRNA end position 
ttttgcgtaa
Secondary structure (Cloverleaf model)
>WENV180277021	SeC	TCA
                   g      GCta ttttgcgtaa
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     G - C          T C
                    T     T A T C C     A
      C C C        T      + | | | |     G
    G       G G G G       G T A G G     C
    G       | + | |                 T T
    T       C T C C
      G G          C     GCGTGTCCCGCCAAAGGGACTG
                    C   C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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