The detailed information of tRNA gene sequence


Sequence ID>WENV180277164
Genome IDOBHV01097735
Search identical group
Phylum/Class[OBHV] metagenome; water
Species
Start position on genome 14
End posion on genome 113
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgtcacttct
tRNA gene sequence 
GGCAGGTCGTGTCAGGCTGGTGCCGGCCCCGGTCTTCAAAACCGGTGGGGCGCGTCGAGA
GGCGTTGTCCGGTGGGTTCGATTCCCATGACTTGCCGCCA
Downstream region at tRNA end position 
gctccccgcg
Secondary structure (Cloverleaf model)
>WENV180277164	SeC	TCA
                   t      GCCA gctccccgcg
                     G - C
                     G - C
                     C - G
                     A - T
                     G + T
                     G - C
                     T - A
                     C - G          T T
                    G     T A C C C     A
      C G G        T      + | | | |     G
    T       A C T G       G T G G G     C
    G         | + |                 T T
    G       C G G C
      T G C        C     TGGGGCGCGTCGAGAGGCGTTGTCCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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