The detailed information of tRNA gene sequence


Sequence ID>WENV180283505
Genome IDOBID01000354
Search identical group
Phylum/Class[OBID] metagenome; sludge
Species
Start position on genome 7336
End posion on genome 7432
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgcgtaaact
tRNA gene sequence 
cGGAGCCGGATCCGTCCTGGTGGTCGGCGCGGCCTTCAAAGCCGTTGTGAGGGATGAAGA
ATCTCTCGGGTGTGTTCGATTCGCACACGGTTCCGCCAa
Downstream region at tRNA end position 
tattaaaggt
Secondary structure (Cloverleaf model)
>WENV180283505	SeC	TCA
                   t      CCAa tattaaaggt
                     c - G
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     C - G
                     G - C          C T
                    G     A C A C G     T
      C C T        A      | | | | +     A
    T       G C C T       T G T G T     G
    G       +   | +                 T C
    G       T C G G
      T G G        C     TGTGAGGGATGAAGAATCTCTCGGG
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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