The detailed information of tRNA gene sequence


Sequence ID>WENV180288289
Genome IDOBIL01109543
Search identical group
Phylum/Class[OBIL] metagenome; hydrothermal vent
Species
Start position on genome 91
End posion on genome 179
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acatattttt
tRNA gene sequence 
AGAGAGTTGGCTGAGTTGGTCGAAAGCACTGGTTTTGAAAACCGGCGAGGGTCACACCTC
CGTGGGTTCGAATCCCACACTCTCTGCCA
Downstream region at tRNA end position 
tttaatcaat
Secondary structure (Cloverleaf model)
>WENV180288289	Ser	TGA
                   t      GCCA tttaatcaat
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G T C G       G T G G G     C
  G           | | |                 T T
  T         A A G C
    C G A          A     CGAGGGTCACACCTCC
                    C - G
                    T + G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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