The detailed information of tRNA gene sequence


Sequence ID>WENV180296141
Genome IDOBJA01000015
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 40533
End posion on genome 40623
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gacagaaatt
tRNA gene sequence 
GGTGAGGTGGCCGAGCGGCTGAAGGCGCGCCCCTGCTAAGGGTGTATAGGCTAATCCCCT
ATCGAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
aatatctatg
Secondary structure (Cloverleaf model)
>WENV180296141	Ser	GCT
                   t      GCCA aatatctatg
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGCTAATCCCCTATC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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