The detailed information of tRNA gene sequence


Sequence ID>WENV180296155
Genome IDOBJA01000019
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 30310
End posion on genome 30236
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttgtcgcttt
tRNA gene sequence 
AGGGGTGTGGTGTCAACGGTAGCACGACAGTCTCCAAAACTGTTTGTACGGGTTCGAATC
CTGTCACCCCTGCCA
Downstream region at tRNA end position 
ttgtttaata
Secondary structure (Cloverleaf model)
>WENV180296155	Trp	CCA
                   t      GCCA ttgtttaata
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T C C     A
      A A C        G      | | + | |     G
    C       T G T G       A C G G G     C
    G       + | | |                 T T
    G       G C A C
      T A          G     TTGT
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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