The detailed information of tRNA gene sequence


Sequence ID>WENV180296273
Genome IDOBJA01000162
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 10355
End posion on genome 10282
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
taaaatatag
tRNA gene sequence 
CGCGGGATGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGTCGGTTCGAGT
CCGGCTCCCGCAACta
Downstream region at tRNA end position 
caagagatta
Secondary structure (Cloverleaf model)
>WENV180296273	fMet	CAT
                   g      ACta caagagatta
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     C G G C C     A
      T G A        G      | + | | |     G
    T       C G A G       G T C G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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