The detailed information of tRNA gene sequence


Sequence ID>WENV180296381
Genome IDOBJA01000415
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 28438
End posion on genome 28348
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccaatatcag
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTATCCGCCGAAAGCGG
ATCAAGGGTTCGAATCCCTTTCTCTCCGCCA
Downstream region at tRNA end position 
gttttccaca
Secondary structure (Cloverleaf model)
>WENV180296381	Ser	GGA
                   g      GCCA gttttccaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       A A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATCCGCCGAAAGCGGATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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