The detailed information of tRNA gene sequence


Sequence ID>WENV180296430
Genome IDOBJA01000515
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 6562
End posion on genome 6651
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
accccggcgc
tRNA gene sequence 
GGAGAGGTGGCGGAGTGGTCGATCGCGTCGGTCTCGAAAACCGATATACTCGCAAGGGTA
TCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gttttcaaaa
Secondary structure (Cloverleaf model)
>WENV180296430	Ser	CGA
                   c      GCCA gttttcaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G C G       G A G G G     C
    G       + | | |                 T T
    T       T C G C
      C G A        G     TATACTCGCAAGGGTATC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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