The detailed information of tRNA gene sequence


Sequence ID>WENV180296766
Genome IDOBJA01002430
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 3732
End posion on genome 3822
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atataacgaa
tRNA gene sequence 
GCCATATTAGCTTAATGGTAGAGTATTTGCCTTCATTGCTGAAAGGCTCTTAATGCAAAG
GGTATTGGTTCGATTCCAATATATGGCACCA
Downstream region at tRNA end position 
tatttgaggt
Secondary structure (Cloverleaf model)
>WENV180296766	SeC	TCA
                   a      ACCA tatttgaggt
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A
                     A - T
                     T - A          T T
                    T     T A A C C     A
        A A        A      | | | | |     G
      T     T T C G       A T T G G     C
      G     + | | +                 T T
      G     G A G T
        T A        A     AAGGCTCTTAATGCAAAGGGT
                    T - A
                    T + G
                    T   T
                    G - C
                    C - G
                  C       T
                  T       T
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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