The detailed information of tRNA gene sequence


Sequence ID>WENV180296900
Genome IDOBJA01004443
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 848
End posion on genome 772
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
cctgtattgg
tRNA gene sequence 
CGCGAGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAA
TCCTGCCCTCGCTACCA
Downstream region at tRNA end position 
ttttacctaa
Secondary structure (Cloverleaf model)
>WENV180296900	fMet	CAT
                   g      ACCA ttttacctaa
                     C   T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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