The detailed information of tRNA gene sequence


Sequence ID>WENV180297001
Genome IDOBJA01007356
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 244
End posion on genome 149
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggacatgttc
tRNA gene sequence 
GGAGGCAGTCAGTAGCCTGGTGGCGCTCACGGTCTTCAAAACCGATGGGGGGCGTATCCC
GTCCCTGGTGAGTTCGATTCTCATCTGCCTCCGCCA
Downstream region at tRNA end position 
atcaataaaa
Secondary structure (Cloverleaf model)
>WENV180297001	SeC	TCA
                   c      GCCA atcaataaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T T
                    T     T A C T C     A
      C C G        C      + | | | |     G
    T       A T G A       G T G A G     C
    G         + | |                 T T
    G       C G C T
      T G G        C     TGGGGGGCGTATCCCGTCCCTG
                    A   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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