The detailed information of tRNA gene sequence


Sequence ID>WENV180297131
Genome IDOBJA01011441
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 767
End posion on genome 856
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtgagtaagt
tRNA gene sequence 
GGAGAGTTGCCGGAGCGGTTGAACGGGGCGGTCTCGAAAACCGTTGTGGGTTTGCGCCCA
CCCAGGGTTCGAATCCCTGACTCTCCGCCA
Downstream region at tRNA end position 
tccttcgatt
Secondary structure (Cloverleaf model)
>WENV180297131	Ser	CGA
                   t      GCCA tccttcgatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TGTGGGTTTGCGCCCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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