The detailed information of tRNA gene sequence


Sequence ID>WENV180297168
Genome IDOBJA01012935
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 1447
End posion on genome 1535
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttaatttatT
tRNA gene sequence 
GGAGAGGTGTCTGAGTGGTTGAAGGTGACGGCCTCGAAAGTCGTTGTGGGCGCAAGCTCA
CCGAGGGTTCGAATCCCTCCCTCTCCGTtt
Downstream region at tRNA end position 
ttcttccctc
Secondary structure (Cloverleaf model)
>WENV180297168	Ser	CGA
                   T      GTtt ttcttccctc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C T       G A G G G     C
    G         + |                   T T
    T       A G G T
      T G A        G     TGTGGGCGCAAGCTCACC
                    A - T
                    C - G
                    G - C
                    G + T
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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