The detailed information of tRNA gene sequence


Sequence ID>WENV180297170
Genome IDOBJA01013211
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 231
End posion on genome 136
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gcttaacccc
tRNA gene sequence 
GGGAGTGGATGAGTCCCGGTGGGCTCCCCGGTCTTCAAAACCGGTGGCGGGTCGCGTTGC
GGGCCGCGGTGGGTTCGACACCCATCCATTCCCGCCt
Downstream region at tRNA end position 
ggttttcatc
Secondary structure (Cloverleaf model)
>WENV180297170	SeC	TCA
                   c      GCCt ggttttcatc
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     G - C
                     G - C          A C
                    A     T A C C C     A
      C C C        T      + | | | |     G
    G       T G A G       G T G G G     C
    G       + | | |                 T T
    T       G C T C
      G G          C     TGGCGGGTCGCGTTGCGGGCCGCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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