The detailed information of tRNA gene sequence


Sequence ID>WENV180297190
Genome IDOBJA01014008
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 129
End posion on genome 41
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tagcgattta
tRNA gene sequence 
GGAGAGTTGGCCGAGCGGTCGAAGGCGCACGCTTGGAAAGCGTGTATACCCCAAAAGGGT
ATCAAGGGTTCGAATCCCTTACTCTCCGCaa
Downstream region at tRNA end position 
attattaaaa
Secondary structure (Cloverleaf model)
>WENV180297190	Ser	GGA
                   a      GCaa attattaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       A A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACCCCAAAAGGGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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