The detailed information of tRNA gene sequence


Sequence ID>WENV180297227
Genome IDOBJA01016252
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 1790
End posion on genome 1879
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gagaaagttt
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTTGATTGCACCGGTCTTGAAAACCGGAGACGGGGTAACCCGT
TCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tacaaaagca
Secondary structure (Cloverleaf model)
>WENV180297227	Ser	TGA
                   t      GCCA tacaaaagca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G       + | | |                 T T
    T       T T G C
      T G A        A     AGACGGGGTAACCCGTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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