The detailed information of tRNA gene sequence


Sequence ID>WENV180297252
Genome IDOBJA01017119
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 743
End posion on genome 833
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttaaaatagt
tRNA gene sequence 
GGAGGAATACCCAAGTCTGGCTGAAGGGATCGGTCTTGAAAACCGACAGGCTGTAAAAGG
CGCGGGGGTTCGAATCCCTCTTCCTCCGCCA
Downstream region at tRNA end position 
taagatgtgc
Secondary structure (Cloverleaf model)
>WENV180297252	Ser	TGA
                   t      GCCA taagatgtgc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C T C C C     A
    C T G A        A      | + | | |     G
  T         A C C C       G G G G G     C
  G           | | |                 T T
  G         A G G G
    C T G A        A     CAGGCTGTAAAAGGCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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