The detailed information of tRNA gene sequence


Sequence ID>WENV180297273
Genome IDOBJA01018741
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 742
End posion on genome 835
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gaataattga
tRNA gene sequence 
GGAGGTGACCGGGGTCCGGTGGCTCCCGCGGTCTTCAAAACCGTTGTGCCGCTTTACGGC
GGCGGGTGGGTTCGACTCCCATTCACCTCCGCCA
Downstream region at tRNA end position 
atttttcttc
Secondary structure (Cloverleaf model)
>WENV180297273	SeC	TCA
                   a      GCCA atttttcttc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T          T C
                    C     T A C C C     A
      C C T        C      + | | | |     G
    G       G G G G       G T G G G     C
    G       | + | |                 T T
    T       C T C C
      G G          C     TGTGCCGCTTTACGGCGGCGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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