The detailed information of tRNA gene sequence


Sequence ID>WENV180297391
Genome IDOBJA01027979
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 1320
End posion on genome 1416
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cgggggttga
tRNA gene sequence 
GGGAAGGGAATCGTCCCCGGTGGGGCGGCCGGACTTCAAATCCGGTTGGGGCAGCGAGCC
TGTCCCGGGTGGGTTCGACTCCCACTCCCCTCCGCCA
Downstream region at tRNA end position 
gggcagccag
Secondary structure (Cloverleaf model)
>WENV180297391	SeC	TCA
                   a      GCCA gggcagccag
                     G - C
                     G - C
                     G + T
                     A   C
                     A   C
                     G - C
                     G - C
                     G + T          T C
                    A     C A C C C     A
      C C C        A      | | | | |     G
    C       T G C T       G T G G G     C
    G       +     +                 T T
    G       G G C G
      T G G        G     TTGGGGCAGCGAGCCTGTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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