The detailed information of tRNA gene sequence


Sequence ID>WENV180297426
Genome IDOBJA01030541
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 914
End posion on genome 1003
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cccttcatct
tRNA gene sequence 
GGAGAGTTGACAGAGTGGCCGATTGTGCCTGACTCGAAATCAGGTGTGCCCGCAAGGGTA
CCGGGGGTTCAAATCCCTCACTCTCCGCCA
Downstream region at tRNA end position 
tttacgtcat
Secondary structure (Cloverleaf model)
>WENV180297426	Ser	CGA
                   t      GCCA tttacgtcat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | + | | |     A
    G       G A C A       G G G G G     C
    G       + | | |                 T T
    C       T T G T
      C G A        G     TGTGCCCGCAAGGGTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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